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3-METHYLADENINE DNA GLYCOSYLASE II FROM ESCHERICHIA COLI
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.5 PROTEIN WAS CRYSTALLIZED FROM 4% PEG 8000, 50 MM NACL, 10 MM TRIS-CL (PH 7.5), 7.5 MM KPO4 (PH 5.9),0.1 MM EDTA, 1.5 MM DITHIOTHREITOL
Crystal Properties Matthews coefficient Solvent content 2.01 38.61
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 58.08 α = 90 b = 75.77 β = 109.94 c = 60.92 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH MIRRORS 1995-10-10 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE ELLIOTT GX-13
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 30 99.8 0.051 0.051 20 7.5 45971 1
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.86 99.5 0.133 0.133 12 6.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD, SIRAS THROUGHOUT 1.8 30 1 45059 4541 98.7 0.194 0.194 0.247 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 3.89 2.15 3.67 2.32
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 22 x_scangle_it 4.36 x_scbond_it 3.02 x_mcangle_it 2.23 x_angle_deg 1.79 x_mcbond_it 1.54 x_improper_angle_d 1.19 x_bond_d 0.011 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 22 x_scangle_it 4.36 x_scbond_it 3.02 x_mcangle_it 2.23 x_angle_deg 1.79 x_mcbond_it 1.54 x_improper_angle_d 1.19 x_bond_d 0.011 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4406 Nucleic Acid Atoms Solvent Atoms 334 Heterogen Atoms 12
Software Software Software Name Purpose MLPHARE phasing X-PLOR refinement DENZO data reduction SCALEPACK data scaling