☰ Navigation Tabs
Biosynthetic thiolase, Cys89 butyrylated
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1DLU
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 293 lithium sulphate, ammonium sulphate, pH 5.0, VAPOR DIFFUSION, SITTING DROP at 293K, VAPOR DIFFUSION, HANGING DROP
Crystal Properties Matthews coefficient Solvent content 3.03 59.34
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 84.353 α = 90 b = 79.314 β = 93.97 c = 147.324 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD MARRESEARCH 2001-09-22 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON MAX II BEAMLINE I711 1.09785 MAX II I711
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.77 50 99.1 0.097 9 3.1 187197 187197 -3 25
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.77 1.8 95.9 0.344 2.6 2.3 8928
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1DLU 1.77 20 187094 187094 8647 99.16 0.2075 0.2075 0.20582 0.24209 0.2259 COPIED FROM 1DLU, MISSING RESOLUTION RANGE COMPLETED RANDOMLY 13.594
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.03 -0.68 -0.05 -0.02
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.412 r_scangle_it 3.842 r_mcangle_it 2.892 r_scbond_it 2.743 r_mcbond_it 2.141 r_angle_refined_deg 1.574 r_angle_other_deg 0.919 r_symmetry_vdw_other 0.295 r_symmetry_vdw_refined 0.259 r_nbd_other 0.246
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_1_deg 6.412 r_scangle_it 3.842 r_mcangle_it 2.892 r_scbond_it 2.743 r_mcbond_it 2.141 r_angle_refined_deg 1.574 r_angle_other_deg 0.919 r_symmetry_vdw_other 0.295 r_symmetry_vdw_refined 0.259 r_nbd_other 0.246 r_symmetry_hbond_refined 0.246 r_xyhbond_nbd_refined 0.235 r_nbd_refined 0.222 r_chiral_restr 0.109 r_nbtor_other 0.086 r_bond_refined_d 0.018 r_gen_planes_refined 0.007 r_bond_other_d 0.003 r_gen_planes_other 0.002 r_dihedral_angle_2_deg r_xyhbond_nbd_other r_symmetry_hbond_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 11290 Nucleic Acid Atoms Solvent Atoms 1091 Heterogen Atoms 32
Software Software Software Name Purpose XDS data scaling XDS data reduction REFMAC refinement