☰ Navigation Tabs
ESTROGEN RELATED RECEPTOR 2 DNA BINDING DOMAIN IN COMPLEX WITH DNA
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_13C-separated_NOESY 0.5 mM hERR2 U-15N 13C,
0.5 mM DNA Strand 1,
0.5 mM DNA Strand 2,
20 mM K2SO4,
50 M ZnSO4,
2 mM dithiothreitol (DTT),
0.001% NaN3 pH 6.8 100% D20 20 mM K2SO4 6.8 ambient 310 2 3D_15N-separated_NOESY 0.5 mM hERR2 U-15N,
0.5 mM DNA Strand 1,
0.5 mM DNA Strand 2,
20 mM K2SO4,
50 M ZnSO4,
2 mM dithiothreitol (DTT),
0.001% NaN3 pH 6.8 5% D2O, 95% H20 20 mM K2SO4 6.8 ambient 310 3 2D Filter Edit Noesy 0.5 mM hERR2 U-15N 13C,
0.5 mM DNA Strand 1,
0.5 mM DNA Strand 2,
20 mM K2SO4,
50 M ZnSO4,
2 mM dithiothreitol (DTT),
0.001% NaN3 pH 6.8 100% D20 20 mM K2SO4 6.8 ambient 310 4 2D Filter Filter Noesy 0.5 mM hERR2 U-15N,
0.5 mM DNA Strand 1,
0.5 mM DNA Strand 2,
20 mM K2SO4,
50 M ZnSO4,
2 mM dithiothreitol (DTT),
0.001% NaN3 pH 6.8 5% D2O, 95% H20 20 mM K2SO4 6.8 ambient 310
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Bruker DRX 600 2 Bruker DRX 800 3 Bruker DMX 750
NMR Refinement Method Details Software distance geometry
simulated annealing NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the lowest energy Conformers Calculated Total Number 32 Conformers Submitted Total Number 20 Representative Model 1 (lowest energy)
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe 2.1 F.Delaglio, S.Grzesiek, G.W.Vuister, Z.Guang, J.Pfeifer, A.Bax 2 data analysis NMRView 4.1.3 B.A.Johnson, R.A.Blevins 3 refinement Amber 6.0 D.A.Case, D.A.Pearlman, et.al. 4 refinement DYANA 1.5 P.Gntert, C.Mumenthaler, K.Wthrich 5 structure solution Amber 6.0 D.A.Case, D.A.Pearlman, J.W.Caldwell, T.E.Cheatham III, W.S.Ross, C.L.Simmerling, T.A.Darden, K.M.Merz, R.V.Stanton, A.L.Cheng, J.J.Vincent, M.Crowley, V.Tsui, R.J.Radmer, Y.Duan, J.Pitera, I.Massova, G.L.Seibel, U.C.Singh, P.K.Weiner, and P.A.Kollman