☰ Navigation Tabs
Crystal Structure of a Zif23-GCN4 Chimera Bound to DNA
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 298 bis-tris propane, magnesium chloride, ammonium acetate, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystal Properties Matthews coefficient Solvent content 4.45 72.36
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.398 α = 90 b = 87.398 β = 90 c = 118.693 γ = 120
Symmetry Space Group P 31 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 133 IMAGE PLATE RIGAKU RAXIS IV 2000-06-08 M SINGLE WAVELENGTH 2 1 x-ray 133 CCD ADSC QUANTUM 4 2001-03-24 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200 1.54 2 SYNCHROTRON NSLS BEAMLINE X4A 0.9999 NSLS X4A
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2 1.5 20 89.5 0.095 14.3 83074 77251 17.8
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1.5 1.59 97.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 1.5 20 2 83074 77251 7807 91.7 0.226 0.216 0.234 RANDOM 25.1
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 21 x_scangle_it 3 x_scbond_it 1.9 x_mcangle_it 1.7 x_improper_angle_d 1.62 x_angle_deg 1.6 x_mcbond_it 1.03 x_bond_d 0.015 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 21 x_scangle_it 3 x_scbond_it 1.9 x_mcangle_it 1.7 x_improper_angle_d 1.62 x_angle_deg 1.6 x_mcbond_it 1.03 x_bond_d 0.015 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 1481 Nucleic Acid Atoms 526 Solvent Atoms 312 Heterogen Atoms 4
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling X-PLOR model building X-PLOR refinement X-PLOR phasing