30-CONFORMER NMR ENSEMBLE OF THE N-TERMINAL, DNA-BINDING DOMAIN OF THE REPLICATION INITIATION PROTEIN FROM A GEMINIVIRUS (TOMATO YELLOW LEAF CURL VIRUS-SARDINIA)
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
| 2 | 3D_15N-SEPARATED_NOESY | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
| 3 | HNHA | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
| 4 | HNHB | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
| 5 | 4D_13C/15N-SEPARATED_NOESY | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
| 6 | 2D HNCOCG AROM | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
| 7 | 2D HNCO AROM | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
| 8 | 4D 13C,13C NOESY | 0.8-1.0MM [10%-13C;U-99% 15N] REP4-121, SODIUM PHOSPHATE 20MM, NACL 100MM, DTT 1MM | 0.3M | 6.6 | AMBIENT | 298 | ||
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | DMX | 500 |
| 2 | Bruker | DMX | 600 |
| 4 | Bruker | DMX | 750 |
| 5 | Bruker | DRX | 800 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| TORSION ANGLE SIMULATED ANHEALING | NMRPipe | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | |
| Conformers Calculated Total Number | |
| Conformers Submitted Total Number | 30 |
| Additional NMR Experimental Information | |
|---|---|
| Details | THIS ENTRY CONTAINS THE 30-CONFORMER ENSEMBLE. THE MINIMIZED AVERAGE STRUCTURE OF THIS ENSEMBLE HAS BEEN DEPOSITED UNDER CODE 1L2M, AND IT IS A GOOD REPRESENTATION OF THE 30-CONFORMER ENSEMBLE CONTAINED HERE. |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | NMRPipe | ||
| 2 | data analysis | NMRView | 4.1.1 | |
| 3 | data analysis | TALOS | ||
| 4 | structure solution | DYANA | ||
| 5 | refinement | DYANA | ||
