Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
The Solution Structure of [d(CGC)r(amamam)d(TTTGCG)]2
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
2D NOESY
20 mM sodium phosphate,
200 mM NaCl and 0.05 mM EDTA (pH 7.0)
100% D2O OR 90% H2O:10% D2O
100% D2O OR 90% H2O:10% D2O
7
1 atm
300
2
DQF-COSY
20 mM sodium phosphate,
200 mM NaCl and 0.05 mM EDTA (pH 7.0)
100% D2O OR 90% H2O:10% D2O
100% D2O OR 90% H2O:10% D2O
7
1 atm
300
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
AVANCE
600
NMR Refinement
Method
Details
Software
SA, MD, MATRIX RELAXATION REFINEMENT
Three-dimensional structures were calculated using 454 NOE distance restraints, 30 hydrogen bond restraints, and 208 backbone, sugar, and glycosidic dihedral angle restraints.
X-PLOR
NMR Ensemble Information
Conformer Selection Criteria
THE SUBMITTED CONFORMER MODELS ARE THE 10 STRUCTURES WITH THE LOWEST ENERGY.
Conformers Calculated Total Number
10
Conformers Submitted Total Number
10
Representative Model
4 (the structure with the lowest energy was selected)
Additional NMR Experimental Information
Details
THE STRUCTURE WAS DETERMINED FROM 2D NMR SPECTROSCOPY WITH UNLABELED SAMPLE.