☰ Navigation Tabs
Solution Structure of the Cdc13 DNA-binding Domain in a Complex with Single-Stranded Telomeric DNA (DNA structure not modeled)
NMR Experiment Experiment Type Sample Contents Solvent Ionic Strength pH Pressure Temperature (K) Spectrometer 1 3D_15N-separated_NOESY 90% H2O/10% D2O 7.0 ambient 303 2 3D_13C-separated_NOESY 100% D2O 7.0 ambient 303 3 4D_13C/15N-separated_NOESY 90% H2O/10% D2O 7.0 ambient 303 4 4D_13C-separated_NOESY 100% D2O 7.0 ambient 308
NMR Spectrometer Information Spectrometer Manufacturer Model Field Strength 1 Varian INOVA 600 2 Varian INOVA 500 3 Bruker DRX 800
NMR Refinement Method Details Software distance geometry, simulated annealing, molecular dynamics DNA STRUCTURE NOT MODELED DUE TO CHEMICAL SHIFT ASSIGNMENT AMBIGUITY. NMRPipe
NMR Ensemble Information Conformer Selection Criteria structures with the least restraint violations, structures with the lowest energy Conformers Calculated Total Number 50 Conformers Submitted Total Number 10 Representative Model 10 (closest to the average)
Additional NMR Experimental Information Details Representative conformer was structure closest to the mean.
Computation: NMR Software # Classification Version Software Name Author 1 processing NMRPipe Delaglio 2 data analysis ANSIG 3.3 Kraulis 3 structure solution X-PLOR 3.851 Brunger 4 refinement X-PLOR 3.851 Brunger