1KKW
NMR Solution Structure of d(CCATGCGTGG)2, G-T mismatch structure
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 4 mM double strand DNA | 99.96% D2O | 200 mM NaCl, 20 mM NaPO4, 10 mM NaN3, 0.1 mM EDTA | 7.0 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
NMR Refinement | ||
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Method | Details | Software |
simulated annealing | VNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | all calculated structures submitted, back calculated data agree with experimental NOESY spectrum |
Conformers Calculated Total Number | 20 |
Conformers Submitted Total Number | 20 |
Representative Model | 1 (closest to the average) |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | collection | VNMR | 6b | varian, inc. |
2 | data analysis | Felix | 98.0 | accelrys |
3 | iterative matrix relaxation | MARDIGRAS | 1 | James, T.L. |
4 | structure solution | Discover | 2.98 | accelrys |
5 | refinement | Discover | 2.98 | accelrys |