Solution Structure of the Lipoic Acid-Bearing Domain of the E2 component of Human, Mitochondrial Branched-Chain alpha-Ketoacid Dehydrogenase
SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 3D_15N-separated_NOESY | 2mM protein U-15N; 50mM phosphate buffer, pH7.5, 100mM NaCl, 0.02% (w/v) NaN3 | 90% H2O, 10% D2O or 100% D2O | 100mM NaCl | 7.5 | ambient | 310 | |
| 2 | HNHA | 2mM protein U-15N; 50mM phosphate buffer, pH7.5, 100mM NaCl, 0.02% (w/v) NaN3 | 90% H2O, 10% D2O or 100% D2O | 100mM NaCl | 7.5 | ambient | 310 | |
| 3 | 3D_13C-separated_NOESY | 2mM protein U-15N,13C; 50mM phosphate buffer, pH7.5, 100mM NaCl, 0.02% (w/v) NaN3 | 90% H2O, 10% D2O or 100% D2O | 100mM NaCl | 7.5 | ambient | 310 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 600 |
| 2 | Bruker | AMX | 500 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| distance geometry simulated annealing molecular dynamics torsion angle dynamics | XwinNMR | |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | |
| Conformers Calculated Total Number | |
| Conformers Submitted Total Number | 1 |
| Representative Model | (minimized average structure) |
| Additional NMR Experimental Information | |
|---|---|
| Details | The structure was determined using triple-resonance NMR spectroscopy |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | collection | XwinNMR | 2.0 | Bruker |
| 2 | processing | XwinNMR | 2.0 | Bruker |
| 3 | data analysis | AURELIA | 2.0.6 | Bruker |
| 4 | refinement | ARIA | 1.0 | Nilges et. al |
| 5 | structure solution | ARIA | 1.0 | Nilges et. al |
