1K6H | pdb_00001k6h

Solution Structure of Conserved AGNN Tetraloops: Insights into Rnt1p RNA processing


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1 mM RNA, 10 mM Na Phosphate, pH 6.4100% D2O10mM Na Phosphate6.4ambient293
22D NOESY1 mM RNA, 10 mM Na Phosphate, pH 6.495% H2O/5% D2O10mM Na Phosphate6.4ambient278
32D DQF-COSY1 mM RNA, 10 mM Na Phosphate, pH 6.4100% D2O10mM Na Phosphate6.4ambient293
42D TOCSY1 mM RNA, 10 mM Na Phosphate, pH 6.495% H2O/5% D2O10mM Na Phosphate6.4ambient293
53D NOESY-HMQC1 mM RNA,15N, 13C, 10 mM Na Phosphate, pH 6.4100% D2O10mM Na Phosphate6.4ambient293
63D HCCH-TOCSY1 mM RNA,15N, 13C, 10 mM Na Phosphate, pH 6.4100% D2O10mM Na Phosphate6.4ambient293
7HP COSY1 mM RNA,15N, 13C, 10 mM Na Phosphate, pH 6.4100% D2O10mM Na Phosphate6.4ambient293
8HSQC1 mM RNA, 15N, 13C, 10 mM Na Phosphate, pH 6.495% H2O/5% D2O10mM Na Phosphate6.4ambient293
9HSQC1 mM RNA, 15N, 13C, 10 mM Na Phosphate, pH 6.495% H2O/5% D2O10mM Na Phosphate6.4ambient278
103D HCP1 mM RNA, 15N, 13C, 10 mM Na Phosphate, pH 6.495% H2O/5% D2O10mM Na Phosphate6.4ambient293
11HNN COSY1 mM RNA, 15N, 13C, 10 mM Na Phosphate, pH 6.495% H2O/5% D2O10mM Na Phosphate6.4ambient278
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX800
2BrukerDRX600
NMR Refinement
MethodDetailsSoftware
simulated annealingXwinNMR
NMR Ensemble Information
Conformer Selection Criteriastructures with the lowest energy
Conformers Calculated Total Number25
Conformers Submitted Total Number20
Representative Model1 (n/a)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR
2processingXwinNMR
3data analysisAURELIA
4structure solutionDiscover
5refinementDiscover