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Endopolygalacturonase I from Stereum purpureum at 0.96 A resolution
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 5 293 PEG 4000, pH 5.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystal Properties Matthews coefficient Solvent content 1.61 44.69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 46.396 α = 72.5 b = 52.023 β = 68.93 c = 37.344 γ = 69.24
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 90 CCD MAR CCD 165 mm 1999-12-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SPRING-8 BEAMLINE BL44B2 0.7 SPring-8 BL44B2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.96 41.5 94 0.037 5.6 6.9 171534 171534 1 1 11.2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.96 1.01 89.4 0.206 3.5 3.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD FREE R 0.96 10 171380 162808 8572 90 0.1137 0.115 0.1137 0.1113 0.1398 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 17 2897.1
RMS Deviations Key Refinement Restraint Deviation s_non_zero_chiral_vol 0.114 s_zero_chiral_vol 0.099 s_approx_iso_adps 0.091 s_similar_adp_cmpnt 0.039 s_from_restr_planes 0.0344 s_angle_d 0.032 s_bond_d 0.017 s_rigid_bond_adp_cmpnt 0.006 s_similar_dist s_anti_bump_dis_restr
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2419 Nucleic Acid Atoms Solvent Atoms 504 Heterogen Atoms 41
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SOLVE phasing SHELXL-97 refinement CCP4 data scaling