SOLUTION NMR
| NMR Experiment | ||||||||
|---|---|---|---|---|---|---|---|---|
| Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
| 1 | 2D NOESY | 1-3 mM oxidized cytochrome c-553 in 10 mM phosphate buffer | 90%H2O+10%D2O; 100% D2O | 10 mM phosphate buffer | 7.5 | Ambient | 288 | |
| 2 | HNHA | 1-3 mM oxidized cytochrome c-553 in 10 mM phosphate buffer | 90%H2O+10%D2O; 100% D2O | 10 mM phosphate buffer | 7.5 | Ambient | 288 | |
| 3 | 1D NOE | 1-3 mM oxidized cytochrome c-553 in 10 mM phosphate buffer | 90%H2O+10%D2O; 100% D2O | 10 mM phosphate buffer | 7.5 | Ambient | 288 | |
| NMR Spectrometer Information | |||
|---|---|---|---|
| Spectrometer | Manufacturer | Model | Field Strength |
| 1 | Bruker | AVANCE | 800 |
| 2 | Bruker | AVANCE | 700 |
| 3 | Bruker | AVANCE | 600 |
| NMR Refinement | ||
|---|---|---|
| Method | Details | Software |
| torsion angle dynamics, restrained energy minimization | PSEUDOCONTACT SHIFTS WERE INCLUDED AS CONSTRAINTS BY MEANS OF MODIFIED DYANA AND SANDER MODULES (PSEUDODYANA, PSEUDOREM) (BANCI ET AL., 1997) | XwinNMR |
| NMR Ensemble Information | |
|---|---|
| Conformer Selection Criteria | target function |
| Conformers Calculated Total Number | 400 |
| Conformers Submitted Total Number | 30 |
| Computation: NMR Software | ||||
|---|---|---|---|---|
| # | Classification | Version | Software Name | Author |
| 1 | processing | XwinNMR | 2.6 | Bruker |
| 2 | data analysis | XEASY | 1.3.13 | Xia |
| 3 | structure solution | DYANA | 1.5 | Guentert |
| 4 | refinement | Amber | 5.0 | Kollman |
