1JSP

NMR Structure of CBP Bromodomain in complex with p53 peptide


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D_15N-HSQC0.5mM CBP bromodomain U-15N; 0.5mM P53 peptide; 100mM phosphate buffer; pH 6.590% H2O/10% D2O6.5ambient298
23D CBCA(CO)NH0.5mM CBP bromodomain U-15N,13C,75% 2H; 0.5mM P53 peptide;100mM phosphate buffer; pH 6.590% H2O/10% D2O6.5ambient298
33D HCCH-TOCSY0.5mM CBP bromodomain U-15N,13C; 0.5mM P53 peptide;100mM phosphate buffer; pH 6.599.9%D2O6.5ambient298
43D_13C-edited_13C/15N-filtered_NOESY0.5mM CBP bromodomain U-15N,13C; 0.5mM P53 peptide;100mM phosphate buffer; pH 6.599.9%D2O6.5ambient298
53D_15N-separated_NOESY0.5mM CBP bromodomain U-15N; 0.5mM P53 peptide; 100mM phosphate buffer; pH 6.590% H2O/10% D2O6.5ambient298
63D_13C-separated_NOESY0.5mM CBP bromodomain U-15N,13C; 0.5mM P53 peptide;100mM phosphate buffer; pH 6.590% H2O/10% D2O6.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerDRX500
2BrukerDRX600
NMR Refinement
MethodDetailsSoftware
distance geometry simulated annealing71 inter-molecular NOEs are observed between protein and peptide.NMRPipe
NMR Ensemble Information
Conformer Selection Criteriastructures with the least restraint violations,structures with the lowest energy
Conformers Calculated Total Number200
Conformers Submitted Total Number20
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingNMRPipe1Frank Delaglio
2data analysisNMRView5.0.3Bruce Johnson
3structure solutionX-PLOR3.1Axel Brunger
4iterative matrix relaxationARIA0.1Michael Nilges
5refinementX-PLOR3.1Axel Brunger