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1.2 mM d(GTG(+G)TATACCAC) duplex in 0.01 M sodium phosphate, 0.1 M NaCl, 0.001M EDTA
90% H2O/10% D2O
0.1 M NaCl
6.8
ambient
278
2
2D NOESY
1.2 mM d(GTG(+G)TATACCAC) duplex in 0.01 M sodium phosphate, 0.1 M NaCl, 0.001M EDTA
100% D2O
0.1 M NaCl
6.8
ambient
278
3
P-COSY
1.2 mM d(GTG(+G)TATACCAC) duplex in 0.01 M sodium phosphate, 0.1 M NaCl, 0.001M EDTA
100% D2O
0.1 M NaCl
6.8
ambient
278
4
HOHAHA
1.2 mM d(GTG(+G)TATACCAC) duplex in 0.01 M sodium phosphate, 0.1 M NaCl, 0.001M EDTA
100% D2O
0.1 M NaCl
6.8
ambient
278
5
P-COSY
1.2 mM d(GTG(+G)TATACCAC) duplex in 0.01 M sodium phosphate, 0.1 M NaCl, 0.001M EDTA
100% D2O
0.1 M NaCl
6.8
ambient
303
6
2D NOESY
1.2 mM d(GTG(+G)TATACCAC) duplex in 0.01 M sodium phosphate, 0.1 M NaCl, 0.001M EDTA
100% D2O
0.1 M NaCl
6.8
ambient
303
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
UNITYPLUS
500
2
Varian
UNITYPLUS
600
NMR Refinement
Method
Details
Software
distance geometry and molecular dynamics
The structure is based on 126 intramolecular DNA constraints, 30 H-bonding constraints, 48 intermolecular drug-DNA constraints, and 48 dihedral constraints
VNMR
NMR Ensemble Information
Conformer Selection Criteria
lowest number of NOE violations
Conformers Calculated Total Number
12
Conformers Submitted Total Number
1
Additional NMR Experimental Information
Details
This structure was determined using standard 2d-NOE buildup studies in H2O and D2O buffers.