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Crystal Structure of the Uncomplexed Pelle Death Domain
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 8 277 45% 2-methyl-2,4-pentanediol, Tris, 0.4 M sodium chloride, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 277.0K
Crystal Properties Matthews coefficient Solvent content 3.47 64.55
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 70.106 α = 90 b = 95.542 β = 90 c = 103.196 γ = 90
Symmetry Space Group I 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2000-02-10 M SINGLE WAVELENGTH 2 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2000-02-10 M SINGLE WAVELENGTH 3 1 x-ray 100 CCD ADSC QUANTUM 4 mirrors 2000-02-10 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F1 0.9470 CHESS F1 2 SYNCHROTRON CHESS BEAMLINE F1 0.9470 CHESS F1 3 SYNCHROTRON CHESS BEAMLINE F2 0.9795, 0.9791, 0.9789, 0.9778 CHESS F2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1,2,3 2.3 25 99.4 0.063 0.063 19.6 5.6 15711 15711 1 3 47.7
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.3 2.35 99.8 0.256 0.256 3 4 1022
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MIR THROUGHOUT 2.3 24.79 15711 15265 1550 97 0.268 0.239 0.239 0.2357 0.258 0.254 RANDOM 55.9
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 18.55 -9.9 -8.66
RMS Deviations Key Refinement Restraint Deviation c_dihedral_angle_d 17 c_scangle_it 3.39 c_mcangle_it 2.46 c_scbond_it 2.08 c_mcbond_it 1.44 c_improper_angle_d 0.96 c_angle_deg 0.8 c_bond_d 0.006
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 848 Nucleic Acid Atoms Solvent Atoms 27 Heterogen Atoms 32
Software Software Software Name Purpose DENZO data reduction SCALEPACK data scaling MLPHARE phasing CNS refinement