1IK1

Solution Structure of an RNA Hairpin from HRV-14


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
12D NOESY1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0100% D2O100 mM7.0ambient298
2DQF-COSY1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0100% D2O100 mM7.0ambient298
3TOCSY1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0100% D2O100 mM7.0ambient298
41H,31P-Hetcor1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0100% D2O100 mM7.0ambient298
51H,13C-HMQC1.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.0100% D2O100 mM7.0ambient298
62D NOESY0.5 mM RNA 14mer; 10 mM NaPi, 90 mM NaCl, 0.1 mM EDTA, pH 7.090% H2O/10% D2O100 mM7.0ambient273
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
NMR Refinement
MethodDetailsSoftware
simulated annealingA total of 172 distance restraints and 40 dihedral angle restraints.VNMR
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number1
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionVNMR
2processingNMRPipe
3data analysisNMRDraw
4data analysisNMRView
5structure solutionDiscover
6refinementDiscover