1I8C
SOLUTION STRUCTURE OF THE WATER-SOLUBLE FRAGMENT OF RAT HEPATIC APOCYTOCHROME B5
SOLUTION NMR
NMR Experiment | ||||||||
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Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 3D_13C-separated_NOESY | 1 mM apocytochrome b5, 13C,15N | 90% H2O/10% D2O | low | 6.2 | ambient | 298 | |
2 | 3D_15N-separated_NOESY | 1 mM apocytochrome b5, 15N | 90% H2O/10% D2O | low | 6.2 | ambient | 298 | |
3 | 2D-NOESY | 2 mM apocytochrome b5 | 90% H2O/10% D2O | low | 6.2 | ambient | 298 | |
4 | 2D-NOESY | 2 mM apocytochrome b5 | 100% D2O | low | 6.2 | ambient | 298 |
NMR Spectrometer Information | |||
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Spectrometer | Manufacturer | Model | Field Strength |
1 | Bruker | AMX | 500 |
2 | Bruker | AVANCE | 600 |
NMR Refinement | ||
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Method | Details | Software |
distance geometry simulated annealing molecular dynamics | His 26, 27, 39, 63, and 80 were protonated at the NE2 position in accordance to 15N NMR data. His 15 has a high pK and was protonated at the ND1 and NE2 positions. Additional details are provided in the primary citation. | XwinNMR |
NMR Ensemble Information | |
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Conformer Selection Criteria | structures with the lowest energy |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 1 |
Additional NMR Experimental Information | |
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Details | The amino acid sequence numbering follows the bovine scheme, with the first four residues given negative values. These four residues are disordered and not included in the coordinates. |
Computation: NMR Software | ||||
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# | Classification | Version | Software Name | Author |
1 | collection | XwinNMR | 2.5 | Bruker |
2 | processing | Felix | 97 | MSI |
3 | data analysis | Felix | 97 | MSI |
4 | structure solution | X-PLOR | 3.851 | Brunger |
5 | refinement | X-PLOR | 3.851 | Brunger |