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Deglucobalhimycin in complex with cell wall pentapeptide
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 0.3M CIT, PH=7, 30% 1,2-PROPANEDIOL, pH 7.00
Crystal Properties Matthews coefficient Solvent content 2.7 38.1
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 48.29 α = 90 b = 48.29 β = 90 c = 39.3 γ = 120
Symmetry Space Group P 32 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH 1999-03-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X11 EMBL/DESY, HAMBURG X11
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 0.99 41.85 99.9 0.053 7.5 29932
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 0.99 1.1 100 0.19 7.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION DIRECT METHODS THROUGHOUT 0.99 41.85 29932 1529 99.9 0.1083 0.1075 0.1403 SHELLS
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 6 280.8 448.5
RMS Deviations Key Refinement Restraint Deviation s_non_zero_chiral_vol 0.19 s_approx_iso_adps 0.126 s_from_restr_planes 0.086 s_anti_bump_dis_restr 0.085 s_zero_chiral_vol 0.084 s_angle_d 0.032 s_similar_dist 0.027 s_similar_adp_cmpnt 0.027 s_bond_d 0.021 s_rigid_bond_adp_cmpnt 0.005
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 320 Nucleic Acid Atoms Solvent Atoms 95 Heterogen Atoms 53
Software Software Software Name Purpose SHELXL-97 refinement DENZO data reduction SCALEPACK data scaling SHELX phasing