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Crystal structure of Decaplanin - space group P21, second form
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1HH3 PDB ENTRY 1HH3
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 1M NA3CIT PH=7.0, PH 7.00
Crystal Properties Matthews coefficient Solvent content 2.37 48.11
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 28.945 α = 90 b = 31.908 β = 109.87 c = 34.735 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 133 CCD SIEMENS 1998-12-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SEALED TUBE SIEMENS-STOE-HUBER
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.13 18.08 96.8 0.0981 12.34 7.14 20450
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.13 1.25 88.2 0.302 4.67 4.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (All) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 1HH3 1.13 18.08 38893 1901 96.8 0.2242 0.2221 0.2051 0.2642 SHELLS
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
Coordinate Error Structure Solution Method Refinement High Resolution Refinement Low Resolution 623.5
RMS Deviations Key Refinement Restraint Deviation s_anti_bump_dis_restr 0.146 s_zero_chiral_vol 0.096 s_approx_iso_adps 0.084 s_from_restr_planes 0.076 s_bond_d 0.042 s_angle_d 0.041 s_rigid_bond_adp_cmpnt 0.014 s_similar_adp_cmpnt 0.011 s_similar_dist s_non_zero_chiral_vol
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 313 Nucleic Acid Atoms Solvent Atoms 163 Heterogen Atoms 153
Software Software Software Name Purpose SHELXL-97 refinement SAINT data reduction SADABS data scaling EPMR phasing