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FADR, FATTY ACID RESPONSIVE TRANSCRIPTION FACTOR FROM E. COLI IN COMPLEX WITH FADB OPERATOR
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1E2X
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 6.5 SODIUM CITRATE PH 6.5
Crystal Properties Matthews coefficient Solvent content 2.48 60.77
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 92.992 α = 90 b = 92.992 β = 90 c = 334.826 γ = 120
Symmetry Space Group P 61 2 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD 2000-12-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON CHESS BEAMLINE F2 CHESS F2
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 3.25 25 98 0.143 6.6 6.2 88082
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 3.25 3.38 98.6 0.458 2.5 5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1E2X 3.25 12 13374 391 98.09 0.265 0.264 0.2611 0.32 0.3235 RANDOM 66.611
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 5.37 2.68 5.37 -8.05
RMS Deviations Key Refinement Restraint Deviation p_scangle_it 3.31 p_scbond_it 2.22 p_mcangle_it 2.05 p_angle_d 1.7 p_mcbond_it 1.35 p_bond_d 0.013 p_angle_deg p_planar_d p_hb_or_metal_coord p_plane_restr
RMS Deviations Key Refinement Restraint Deviation p_scangle_it 3.31 p_scbond_it 2.22 p_mcangle_it 2.05 p_angle_d 1.7 p_mcbond_it 1.35 p_bond_d 0.013 p_angle_deg p_planar_d p_hb_or_metal_coord p_plane_restr p_chiral_restr p_singtor_nbd p_multtor_nbd p_xhyhbond_nbd p_xyhbond_nbd p_planar_tor p_staggered_tor p_orthonormal_tor p_transverse_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3631 Nucleic Acid Atoms 773 Solvent Atoms 25 Heterogen Atoms 5
Software Software Software Name Purpose REFMAC refinement DENZO data reduction SCALEPACK data scaling AMoRE phasing