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DDAH FROM PSEUDOMONAS AERUGINOSA. C249S MUTANT COMPLEXED WITH CITRULLINE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model Other NATIVE DDAH
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, SITTING DROP 8.5 SITTING DROPS; EQUAL QUANTITIES OF PROTEIN SOLUTION AND WELL SOLUTION. PROTEIN SOLUTION 14 MG/ML IN 50MM TRIS PH8, 5MMDTT, 10:1 MOLAR RATIO OF CITRULLINE. WEEL SOLUTION ).1M TRIS PH 8.5, 0.2M NA ACETATE, 25%W/V PEG4000.
Crystal Properties Matthews coefficient Solvent content 2.1 40
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 69.814 α = 90 b = 61.798 β = 95.15 c = 54.618 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 CCD ADSC CCD MIRROR 2000-05-15 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX14.1 SRS PX14.1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.8 54.2 99 0.045 10 3.5 20847
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.8 1.9 99 0.082 8 3.5
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT NATIVE DDAH 1.8 30 20307 1056 99.2 0.191 0.19 0.218 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 3.361 r_scbond_it 2.142 r_angle_other_deg 1.925 r_mcangle_it 1.417 r_mcbond_it 0.826 r_symmetry_vdw_refined 0.233 r_nbd_refined 0.223 r_symmetry_hbond_refined 0.204 r_chiral_restr 0.139 r_xyhbond_nbd_refined 0.138
RMS Deviations Key Refinement Restraint Deviation r_scangle_it 3.361 r_scbond_it 2.142 r_angle_other_deg 1.925 r_mcangle_it 1.417 r_mcbond_it 0.826 r_symmetry_vdw_refined 0.233 r_nbd_refined 0.223 r_symmetry_hbond_refined 0.204 r_chiral_restr 0.139 r_xyhbond_nbd_refined 0.138 r_bond_refined_d 0.011 r_gen_planes_refined 0.007 r_bond_other_d r_angle_refined_deg r_dihedral_angle_1_deg r_dihedral_angle_2_deg r_dihedral_angle_3_deg r_dihedral_angle_4_deg r_gen_planes_other r_nbd_other r_nbtor_refined r_nbtor_other r_xyhbond_nbd_other r_metal_ion_refined r_metal_ion_other r_symmetry_vdw_other r_symmetry_hbond_other r_symmetry_metal_ion_refined r_symmetry_metal_ion_other r_mcbond_other r_mcangle_other r_scbond_other r_scangle_other r_long_range_B_refined r_long_range_B_other r_rigid_bond_restr r_sphericity_free r_sphericity_bonded
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2011 Nucleic Acid Atoms Solvent Atoms 144 Heterogen Atoms 12
Software Software Software Name Purpose REFMAC refinement MOSFLM data reduction SCALA data scaling AMoRE phasing