Best model of the electron transfer complex between cytochrome c3 and [Fe]-hydrogenase
SOLUTION NMR - THEORETICAL MODEL
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
HSQC
10 MM PHOSPHATE BUFFER
5.9
1 atm
296
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Bruker
DRX
500
2
Bruker
DRX
500
NMR Refinement
Method
Details
Software
A MOLECULAR DYNAMICS CALCULATION (AMBER FORCE FIELD) WITH SHAKE RESTRAINTS FOR THE HETEROATOMS WAS PERFORMED HEAT-BATH TEMPERATURE: 280 K INITIAL VELOCITIES FROM A MAXWELL-BOLTZMAN DISTRIBUTION AT 280K. SHAKE RESTRAINTS WITH A TOLERANCE OF 0.0004. THIS IS A MODEL COMPLEX OBTAINED BY NMR-RESTRAINED SOFT DOCKING AND MINIMIZATION.
X-PLOR
NMR Ensemble Information
Conformer Selection Criteria
Conformers Calculated Total Number
Conformers Submitted Total Number
1
Additional NMR Experimental Information
Details
THE COMPLEX MODEL WAS DETERMINED WITH NMR-RESTRAINED (HSQC) SOFT DOCKING, THEN MINIMIZED BY MOLECULAR DYNAMICS