1G22
SOLUTION STRUCTURE OF A MODIFIED HUMAN CENTROMERIC FRAGMENT
SOLUTION NMR
NMR Experiment | ||||||||
---|---|---|---|---|---|---|---|---|
Experiment | Type | Sample Contents | Solvent | Ionic Strength | pH | Pressure | Temperature (K) | Spectrometer |
1 | 2D NOESY | 1 mM OF UNLABELED DNA | H2O | ~10mM NaCL | 5.8 | AMBIENT | 288 | |
2 | DQF-COSY | 1 mM OF UNLABELED DNA | H2O | ~10mM NaCL | 5.8 | AMBIENT | 288 | |
3 | TOCSY | 1 mM OF UNLABELED DNA | H2O | ~10mM NaCL | 5.8 | AMBIENT | 288 | |
4 | 31P-1H HETERO-TOCSY | 1 mM OF UNLABELED DNA | H2O | ~10mM NaCL | 5.8 | AMBIENT | 288 | |
5 | 13C-1H HSQC | 1 mM OF UNLABELED DNA | H2O | ~10mM NaCL | 5.8 | AMBIENT | 288 | |
6 | HMBC | 1 mM OF UNLABELED DNA | H2O | ~10mM NaCL | 5.8 | AMBIENT | 288 | |
7 | 31P-1H HETERO-COSY | 1 mM OF UNLABELED DNA | H2O | ~10mM NaCL | 5.8 | AMBIENT | 288 |
NMR Spectrometer Information | |||
---|---|---|---|
Spectrometer | Manufacturer | Model | Field Strength |
1 | Varian | INOVA | 500 |
NMR Refinement | ||
---|---|---|
Method | Details | Software |
NMR-BASED SIMULATED ANNEALING | X-PLOR |
NMR Ensemble Information | |
---|---|
Conformer Selection Criteria | structures with the least restraint violations |
Conformers Calculated Total Number | 100 |
Conformers Submitted Total Number | 1 |
Representative Model | 1 (fewest violations and lowest energy) |
Additional NMR Experimental Information | |
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Details | THE STRUCTURE WAS DETERMINED USING 2D HOMONUCLEAR AND NATURAL ABUNDANCE HETERONUCLEAR TECHNIQUES AT A TEMPERATURES 260-288. |
Computation: NMR Software | ||||
---|---|---|---|---|
# | Classification | Version | Software Name | Author |
1 | refinement | X-PLOR | 3.851 | BRUNGER, A.T. |
2 | processing | Felix | 98 | MSI |
3 | collection | VNMR | 6.2 | VARIAN |
4 | data analysis | MOLMOL | 2.4 | Koradi et al. |
5 | data analysis | Curves | Lavery & Sklenar |