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HUMAN 17-BETA-HYDROXYSTEROID-DEHYDROGENASE TYPE 1 MUTANT H221Q COMPLEXED WITH ESTRADIOL
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1FDT PDB ENTRY 1FDT
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7 PROTEIN WAS CRYSTALLIZED FROM PEG 4000 30%, 100 MM HEPES BUFFER PH 7.0, 100 MM MGCL2, 0.5 MM ESTRADIOL, PROPANE DIOL 2-4%
Crystal Properties Matthews coefficient Solvent content 2.46 50
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 123.67 α = 90 b = 45.49 β = 98.21 c = 61.63 γ = 90
Symmetry Space Group C 1 2 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 300 AREA DETECTOR SIEMENS-NICOLET X100 COLLIMATOR 1994-04-26 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RUH2R
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.7 35.8 65.2 0.071 2.54 6352
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.7 2.83
Refinement Statistics Diffraction ID Structure Solution Method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT PDB ENTRY 1FDT 2.7 10 2 4887 229 0.178 0.1901 0.263 0.2737 RANDOM 16.29
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_scangle_it 1.14 p_mcangle_it 0.768 p_scbond_it 0.684 p_mcbond_it 0.417 p_chiral_restr 0.178 p_planar_d 0.046 p_angle_d 0.031 p_plane_restr 0.013 p_bond_d 0.012 p_angle_deg
RMS Deviations Key Refinement Restraint Deviation p_scangle_it 1.14 p_mcangle_it 0.768 p_scbond_it 0.684 p_mcbond_it 0.417 p_chiral_restr 0.178 p_planar_d 0.046 p_angle_d 0.031 p_plane_restr 0.013 p_bond_d 0.012 p_angle_deg p_hb_or_metal_coord p_singtor_nbd p_multtor_nbd p_xhyhbond_nbd p_xyhbond_nbd p_planar_tor p_staggered_tor p_orthonormal_tor p_transverse_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2128 Nucleic Acid Atoms Solvent Atoms 8 Heterogen Atoms 20
Software Software Software Name Purpose AMoRE phasing REFMAC refinement XENGEN data reduction