1F43

SOLUTION STRUCTURE OF THE MATA1 HOMEODOMAIN


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY1.5 mM MATa1 (66-126) U-15N 25 mM deuterated acetate, pH 4.5, 100 mM KCl, 0.01% NaN3; 90% H2O, 10% D2O90% H2O/10% D2O100 mM KCl4.5ambient298
2HNHA1.5 mM MATa1 (66-126) U-15N 25 mM deuterated acetate, pH 4.5, 100 mM KCl, 0.01% NaN3; 90% H2O, 10% D2O90% H2O/10% D2O100 mM KCl4.5ambient298
3HNCA-J1.5 mM MATa1(66-126) U-15N,13C 25 mM deuterated acetate, pH 4.5, 100 mM KCl, 0.01% NaN3; 90% H2O, 10% D2O90% H2O/10% D2O100 mM KCl4.5ambient298
42D NOESY1.5 mM MATa1 (66-126) 25 mM deuterated acetate, pH 4.5, 100 mM KCl, 0.01% NaN3; 90% H2O, 10% D2O90% H2O/10% D2O100 mM KCl4.5ambient298
5DQF-COSY1.5 mM MATa1 (66-126) 25 mM deuterated acetate, pH 4.5, 100 mM KCl, 0.01% NaN3; 90% H2O, 10% D2O90% H2O/10% D2O100 mM KCl4.5ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1BrukerAVANCE600
2BrukerAVANCE500
NMR Refinement
MethodDetailsSoftware
distance geometry and simulated annealingThe structure is based on a total of 1178 NOE-derived distance constraints, 38 dihedral angle constraints, and 42 hydrogen bond restraints.XwinNMR
NMR Ensemble Information
Conformer Selection Criteriatarget function
Conformers Calculated Total Number100
Conformers Submitted Total Number20
Representative Model17 (closest to the average)
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1collectionXwinNMR2.3Bruker Instruments
2data analysisFelix970Molecular Simulations, Inc.
3processingFelix970Molecular Simulations, Inc.
4refinementX-PLOR3.851A. Brunger