1EV0

SOLUTION STRUCTURE OF THE MINE TOPOLOGICAL SPECIFICITY DOMAIN


SOLUTION NMR
NMR Experiment
ExperimentTypeSample ContentsSolventIonic StrengthpHPressureTemperature (K)Spectrometer
13D_15N-separated_NOESY3.0 mM U-15N,13C MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1 mM EDTA; 0.02% sodium azide; 1 mM 4-(2-aminoethyl)benzenesulfonyl fluoride; pH 5.792.5% H2O, 7.5% D2O0.0755.7ambient298
23D_HNHA and 3D_HNHB3.0 mM U-15N,13C MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1 mM EDTA; 0.02% sodium azide; 1 mM 4-(2-aminoethyl)benzenesulfonyl fluoride; pH 5.792.5% H2O, 7.5% D2O0.0755.7ambient298
32D HMQC-J3.0 mM U-15N,13C MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1 mM EDTA; 0.02% sodium azide; 1 mM 4-(2-aminoethyl)benzenesulfonyl fluoride; pH 5.792.5% H2O, 7.5% D2O0.0755.7ambient298
43D_15N-separated_TOCSY3.0 mM U-15N,13C MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1 mM EDTA; 0.02% sodium azide; 1 mM 4-(2-aminoethyl)benzenesulfonyl fluoride; pH 5.792.5% H2O, 7.5% D2O0.0755.7ambient298
53D_13C-separated_NOESY3.0 mM U-15N,13C MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1.5 mM EDTA; 0.02% sodium azide; 0.2 mM PMSF; pH 5.7100% D2O0.0755.7ambient298
63D_CBCA(CO)NH and 3D_HNCACB3.5 mM U-15N MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1 mM EDTA; 0.02% sodium azide; 1 mM 4-(2-aminoethyl)benzenesulfonyl fluoride; pH 5.792.5% H2O, 7.5% D2O0.0755.7ambient298
73D HNCO3.5 mM U-15N MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1 mM EDTA; 0.02% sodium azide; 1 mM 4-(2-aminoethyl)benzenesulfonyl fluoride; pH 5.792.5% H2O, 7.5% D2O0.0755.7ambient298
83D HCCH-TOCSY3.0 mM U-15N,13C MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1.5 mM EDTA; 0.02% sodium azide; 0.2 mM PMSF; pH 5.7100% D2O0.0755.7ambient298
93D_C(CO)NH_TOCSY and 3D_HC(CO)NH_TOCSY3.5 mM U-15N MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1 mM EDTA; 0.02% sodium azide; 1 mM 4-(2-aminoethyl)benzenesulfonyl fluoride; pH 5.792.5% H2O, 7.5% D2O0.0755.7ambient298
1013C and 15N 3D_edited/filtered_NOESY2.13 mM unlabeled MinE; 2.06 mM U-15N,13C MinE; 20 mM sodium phosphate; 50 mM NaCl; 15 mM DTT; 1.5 mM EDTA; 0.02% sodium azide; 0.2 mM PMSF; pH 5.795% H2O/5% D2O0.0755.7ambient298
NMR Spectrometer Information
SpectrometerManufacturerModelField Strength
1VarianINOVA600
2VarianINOVA500
NMR Refinement
MethodDetailsSoftware
torsion angle dynamics followed by dynamical simulated annealing900 structures were calculated using torsion angle dynamics (DYANA). The best 60 structures were then refined using dynamical simulated annealing in X-PLOR.Felix
NMR Ensemble Information
Conformer Selection CriteriaLowest energy and least restraint violations
Conformers Calculated Total Number60
Conformers Submitted Total Number20
Representative Model1 (lowest energy)
Additional NMR Experimental Information
DetailsThe structure was determined using triple-resonance NMR spectroscopy. Intermonomer NOEs were determined using a heterolabeled protein sample.
Computation: NMR Software
#ClassificationVersionSoftware NameAuthor
1processingFelix97.0Molecular Simulations
2data analysisXEASY1.3.13Tai-he Xia and Christian Bartels
3structure solutionDYANA1.5Peter Guentert
4refinementX-PLOR3.851Axel Brunger