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MAD structure of OXA10 class D beta-lactamase
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 8.2 AMMONIUMS SULFATE 2.0 M, TRIS HCL 100 MM, PH 8.2-8.5
Crystal Properties Matthews coefficient Solvent content 2.49 0.561
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 65.53 α = 90 b = 82.94 β = 95.03 c = 101.42 γ = 90
Symmetry Space Group P 1 21 1
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 100 IMAGE PLATE MARRESEARCH COLLIMATOR 2000-04-15 M MAD
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON EMBL/DESY, HAMBURG BEAMLINE X31 0.95375, 1.0376 EMBL/DESY, HAMBURG X31
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.653 43.1 98.9 0.064 8.1 4.7 127968 19.315
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 1.65 1.75 93.4 0.322 2.1 3.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MAD THROUGHOUT 1.66 40 121338 6428 99.8 0.18057 0.1793 0.20966 RANDOM 19.74
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 31.9 p_staggered_tor 11.7 p_planar_tor 5.6 p_scbond_it 2.349 p_mcangle_it 1.128 p_mcbond_it 0.796 p_multtor_nbd 0.223 p_singtor_nbd 0.171 p_xyhbond_nbd 0.125 p_chiral_restr 0.067
RMS Deviations Key Refinement Restraint Deviation p_transverse_tor 31.9 p_staggered_tor 11.7 p_planar_tor 5.6 p_scbond_it 2.349 p_mcangle_it 1.128 p_mcbond_it 0.796 p_multtor_nbd 0.223 p_singtor_nbd 0.171 p_xyhbond_nbd 0.125 p_chiral_restr 0.067 p_planar_d 0.017 p_angle_d 0.016 p_plane_restr 0.0065 p_bond_d 0.004 p_angle_deg p_hb_or_metal_coord p_scangle_it p_xhyhbond_nbd p_orthonormal_tor p_special_tor
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 7643 Nucleic Acid Atoms Solvent Atoms 949 Heterogen Atoms 163
Software Software Software Name Purpose MOSFLM data reduction SCALA data scaling SHARP phasing SOLVE phasing REFMAC refinement