☰ Navigation Tabs
CRYSTAL AND MOLECULAR STRUCTURE OF A DNA DUPLEX CONTAINING THE CARCINOGENIC LESION O6-METHYLGUANINE
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION 7 pH 7.00, VAPOR DIFFUSION
Crystal Properties Matthews coefficient Solvent content 1.66 25.93
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 17.85 α = 90 b = 30.87 β = 90 c = 43.98 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 183 AREA DETECTOR SIEMENS-NICOLET
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU200
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 1.9 0.0693 1597 1246
Refinement Statistics Diffraction ID Structure Solution Method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) Mean Isotropic B X-RAY DIFFRACTION 1.9 8 1217 0.19 0.21
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation n_phos_bond_d 0.051 n_phos_bond_angle_d 0.048 n_sugar_bond_angle_d 0.027 n_sugar_bond_d 0.014 n_bond_d n_angle_d n_planar_d n_hb_or_metal_coord n_sugar_bond_it n_sugar_angle_it
RMS Deviations Key Refinement Restraint Deviation n_phos_bond_d 0.051 n_phos_bond_angle_d 0.048 n_sugar_bond_angle_d 0.027 n_sugar_bond_d 0.014 n_bond_d n_angle_d n_planar_d n_hb_or_metal_coord n_sugar_bond_it n_sugar_angle_it n_phos_bond_it n_phos_angle_it n_bond_angle_restr n_dihedral_angle_restr n_impr_tor n_plane_restr n_chiral_restr n_singtor_nbd n_multtor_nbd n_xhyhbond_nbd
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms Nucleic Acid Atoms 240 Solvent Atoms 60 Heterogen Atoms 2
Software Software Software Name Purpose NUCLSQ refinement