☰ Navigation Tabs
N276D MUTANT OF ESCHERICHIA COLI TEM-1 BETA-LACTAMASE
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 1BTL PDB ENTRY 1BTL
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 7.8 pH 7.80
Crystal Properties Matthews coefficient Solvent content 1.93 36.25
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 41.82 α = 90 b = 60.36 β = 90 c = 88.65 γ = 90
Symmetry Space Group P 21 21 21
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 277 IMAGE PLATE RIGAKU RAXIS IIC MIRRORS 1995-04-26 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 ROTATING ANODE RIGAKU RU300
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.28 24.5 81.6 0.038 25.2 2.2 8771 18
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 2.28 2.34 54 0.077 15.1 2.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION OTHER THROUGHOUT PDB ENTRY 1BTL 2.28 23.6 8755 563 81.5 0.165 0.165 0.1604 0.235 0.2327 RANDOM 22.5
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.51 1.36 -1.88
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 22.3 x_scangle_it 5.57 x_scbond_it 4.2 x_mcangle_it 3.71 x_mcbond_it 2.6 x_angle_deg 1.2 x_improper_angle_d 1.09 x_bond_d 0.005 x_bond_d_na x_bond_d_prot
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 22.3 x_scangle_it 5.57 x_scbond_it 4.2 x_mcangle_it 3.71 x_mcbond_it 2.6 x_angle_deg 1.2 x_improper_angle_d 1.09 x_bond_d 0.005 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 2005 Nucleic Acid Atoms Solvent Atoms 76 Heterogen Atoms
Software Software Software Name Purpose MOSFLM data reduction ROTAVATA/AGROVATA data reduction X-PLOR model building X-PLOR refinement CCP4 data scaling ROTAVATA data scaling X-PLOR phasing