Find PDB structures and Computed Structure Models (CSM) by combining queries from tools in this suite: Attribute Search, Sequence Similarity, Sequence Motif, 3D Similarity, and 3D Motif with 'AND' logic.
DNA TRIPLEX WITH 5' AND 3' JUNCTIONS, NMR, 10 STRUCTURES
SOLUTION NMR
NMR Experiment
Experiment
Type
Sample Contents
Solvent
Ionic Strength
pH
Pressure
Temperature (K)
Spectrometer
1
NOESY DQF-COSY
0.1
5
1 atm
313
2
ROESY
0.1
5
1 atm
313
3
13C-HSQC
0.1
5
1 atm
313
NMR Spectrometer Information
Spectrometer
Manufacturer
Model
Field Strength
1
Varian
UNITYPLUS
500
2
Varian
UNITYPLUS
600
NMR Refinement
Method
Details
Software
RESTRAINED MOLECULAR DYNAMICS
RESTRAINED MD
Discover
NMR Ensemble Information
Conformer Selection Criteria
LEAST RESTRAINT VIOLATIONS
Conformers Calculated Total Number
30
Conformers Submitted Total Number
10
Additional NMR Experimental Information
Details
THE STRUCTURES WERE DETERMINED FROM NOE AND J-COUPLING DATA ON TWO INTRAMOLECULAR DNA TRIPLE HELICES CONTAINING IDENTICAL CORE SEGMENTS. THE RESTRAINTS WERE GENERATED FOR THE SUPERMOLECULE CONTAINING THE CORE TRIPLEX REGION AND THE 5' AND 3' DUPLEX EXTEN SIONS.