1BOG

ANTI-P24 (HIV-1) FAB FRAGMENT CB41 COMPLEXED WITH AN EPITOPE-HOMOLOGOUS PEPTIDE


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17.5pH 7.5
Crystal Properties
Matthews coefficientSolvent content
4.871

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 104.43α = 90
b = 104.43β = 90
c = 295.05γ = 120
Symmetry
Space GroupP 61 2 2

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray288IMAGE PLATEMARRESEARCHBENT MIRROR1995-10-19M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X11EMBL/DESY, HAMBURGX11

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
12.691960.0765.530270242

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Cut-off Sigma (F)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 2HFL2.6912283601540960.2460.307RANDOM
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_special_tor83.9
p_staggered_tor23.5
p_transverse_tor18.1
p_planar_tor9
p_scangle_it2.995
p_mcangle_it2.745
p_scbond_it1.836
p_mcbond_it1.568
p_chiral_restr0.782
p_multtor_nbd0.251
RMS Deviations
KeyRefinement Restraint Deviation
p_special_tor83.9
p_staggered_tor23.5
p_transverse_tor18.1
p_planar_tor9
p_scangle_it2.995
p_mcangle_it2.745
p_scbond_it1.836
p_mcbond_it1.568
p_chiral_restr0.782
p_multtor_nbd0.251
p_xyhbond_nbd0.196
p_singtor_nbd0.195
p_planar_d0.04
p_angle_d0.036
p_plane_restr0.0236
p_bond_d0.011
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms3362
Nucleic Acid Atoms
Solvent Atoms48
Heterogen Atoms

Software

Software
Software NamePurpose
MOSFLMdata reduction
CCP4data reduction
AMoREphasing
REFMACrefinement
CCP4data scaling