1B7D

NEUROTOXIN (TS1) FROM BRAZILIAN SCORPION TITYUS SERRULATUS


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
16pH 6.0
Crystal Properties
Matthews coefficientSolvent content
1.8132.84

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 22.21α = 90
b = 36.54β = 100.76
c = 31.72γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray295IMAGE PLATEMAR scanner 345 mm plateCYLINDRICAL MIRRORMSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONLNLS BEAMLINE D03B-MX1LNLSD03B-MX1

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.731397.10.0662.65149
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.731.7781.60.2632.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1AHO1.7313514997.10.1780.238RANDOM21.1
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_special_tor15
p_staggered_tor12.9
p_transverse_tor10
p_scangle_it6.481
p_scbond_it4.698
p_planar_tor4.3
p_mcangle_it3.38
p_mcbond_it2.404
p_multtor_nbd0.27
p_xyhbond_nbd0.181
RMS Deviations
KeyRefinement Restraint Deviation
p_special_tor15
p_staggered_tor12.9
p_transverse_tor10
p_scangle_it6.481
p_scbond_it4.698
p_planar_tor4.3
p_mcangle_it3.38
p_mcbond_it2.404
p_multtor_nbd0.27
p_xyhbond_nbd0.181
p_singtor_nbd0.177
p_chiral_restr0.144
p_angle_d0.032
p_planar_d0.032
p_plane_restr0.027
p_bond_d0.012
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms483
Nucleic Acid Atoms
Solvent Atoms65
Heterogen Atoms5

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing
REFMACrefinement