X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
17pH 7.0
Crystal Properties
Matthews coefficientSolvent content
3.3569

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 56.95α = 90
b = 56.95β = 90
c = 135.8γ = 120
Symmetry
Space GroupP 65

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray293IMAGE PLATEMARRESEARCHMIRRORS1996-11-26M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONEMBL/DESY, HAMBURG BEAMLINE X31EMBL/DESY, HAMBURGX31

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.7251000.0460.04627.34.727413-320
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.71.7299.80.3080.3083.74.2

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTFREE RPDB ENTRY 1BRS1.7252735227391000.1620.160.19RANDOM24.8
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
23.83.523.821.8
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor23.5
p_staggered_tor17
p_planar_tor12.8
p_scangle_it7.4
p_scbond_it5.5
p_mcangle_it4.2
p_mcbond_it2.9
p_multtor_nbd0.264
p_chiral_restr0.257
p_singtor_nbd0.187
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor23.5
p_staggered_tor17
p_planar_tor12.8
p_scangle_it7.4
p_scbond_it5.5
p_mcangle_it4.2
p_mcbond_it2.9
p_multtor_nbd0.264
p_chiral_restr0.257
p_singtor_nbd0.187
p_xhyhbond_nbd0.143
p_xyhbond_nbd0.143
p_planar_d0.089
p_angle_d0.04
p_plane_restr0.035
p_bond_d0.025
p_angle_deg
p_hb_or_metal_coord
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms1488
Nucleic Acid Atoms
Solvent Atoms190
Heterogen Atoms

Software

Software
Software NamePurpose
DENZOdata reduction
SCALEPACKdata scaling
AMoREphasing
REFMACrefinement