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MOUSE GLANDULAR KALLIKREIN-13 (PRORENIN CONVERTING ENZYME)
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2KAI PDB ENTRY 2KAI
Crystallization Crystalization Experiments ID Method pH Temperature Details 1 VAPOR DIFFUSION, HANGING DROP 6.5 MGK-13 (57 MG/ML) WAS CRYSTALLIZED USING 10-15% PEG8000, 0.2M LISO4, 0.1M SODIUM CACODYLATE, PH 6.5 BY HANGING DROP VAPOR DIFFUSION METHOD., vapor diffusion - hanging drop
Crystal Properties Matthews coefficient Solvent content 2.51 47.7
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 73.75 α = 90 b = 73.75 β = 90 c = 192.71 γ = 90
Symmetry Space Group P 43 21 2
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol 1 1 x-ray 277 IMAGE PLATE MARRESEARCH SYNCHROTRON 1995-07-23 M
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline 1 SYNCHROTRON SRS BEAMLINE PX9.6 SRS PX9.6
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) R Sym I (Observed) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot 1 2.55 40.33 95.3 0.065 0.065 9.6 2.5 17034 2
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) R-Sym I (Observed) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) 1 2.55 2.69 86.8 0.345 0.345 1.7 2.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Starting model Resolution (High) Resolution (Low) Cut-off Sigma (F) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (Observed) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) R-Free Selection Details Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT PDB ENTRY 2KAI 2.6 40.33 2 16364 785 95.3 0.197 0.197 0.2132 0.271 0.2699 RANDOM
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3]
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 24.8 x_angle_deg 1.74 x_improper_angle_d 1.279 x_bond_d 0.008 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na
RMS Deviations Key Refinement Restraint Deviation x_dihedral_angle_d 24.8 x_angle_deg 1.74 x_improper_angle_d 1.279 x_bond_d 0.008 x_bond_d_na x_bond_d_prot x_angle_d x_angle_d_na x_angle_d_prot x_angle_deg_na x_angle_deg_prot x_dihedral_angle_d_na x_dihedral_angle_d_prot x_improper_angle_d_na x_improper_angle_d_prot x_mcbond_it x_mcangle_it x_scbond_it x_scangle_it
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 3630 Nucleic Acid Atoms Solvent Atoms 119 Heterogen Atoms 56
Software Software Software Name Purpose MOSFLM data reduction CCP4 data reduction X-PLOR model building X-PLOR refinement CCP4 data scaling X-PLOR phasing