1A4I

HUMAN TETRAHYDROFOLATE DEHYDROGENASE / CYCLOHYDROLASE


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
15.5pH 5.5
Crystal Properties
Matthews coefficientSolvent content
2.144

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 67.523α = 90
b = 135.843β = 90
c = 61.403γ = 90
Symmetry
Space GroupP 21 21 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDPRINCETON 2KMIRRORS1996-10-05M
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONCHESS BEAMLINE F2CHESSF2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.5900.068107557816.3

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMAD SELENOMETTHROUGHOUT1.520716793816900.1990.235RANDOM19.5
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor33
p_staggered_tor15.9
p_planar_tor4.4
p_scangle_it3.9
p_scbond_it2.5
p_mcangle_it2.1
p_mcbond_it1.6
p_multtor_nbd0.254
p_singtor_nbd0.178
p_xyhbond_nbd0.162
RMS Deviations
KeyRefinement Restraint Deviation
p_transverse_tor33
p_staggered_tor15.9
p_planar_tor4.4
p_scangle_it3.9
p_scbond_it2.5
p_mcangle_it2.1
p_mcbond_it1.6
p_multtor_nbd0.254
p_singtor_nbd0.178
p_xyhbond_nbd0.162
p_chiral_restr0.144
p_planar_d0.04
p_angle_d0.033
p_plane_restr0.026
p_bond_d0.015
p_angle_deg
p_hb_or_metal_coord
p_xhyhbond_nbd
p_orthonormal_tor
p_special_tor
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms4396
Nucleic Acid Atoms
Solvent Atoms407
Heterogen Atoms96

Software

Software
Software NamePurpose
MLPHAREphasing
REFMACrefinement
DENZOdata reduction
SCALEPACKdata scaling