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Crystal Structure of FtsZ with F6616-6210
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-75 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.63 53.15
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.649 α = 90 b = 88.649 β = 90 c = 179.549 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-75 ftsz-75 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-03-29 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-75 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920194 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-75 1.735 44.325 100 0.132 0.137 0.037 0.999 12.9 13.4 82221
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-75 1.735 1.765 100 2.741 2.847 0.767 0.331 13.7
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.735 44.364 82205 4168 99.942 0.183 0.1814 0.1898 0.2064 0.2157 30.359
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.001 0.001 0.001 -0.004
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.73 r_dihedral_angle_3_deg 14.498 r_dihedral_angle_2_deg 11.729 r_lrange_it 8.535 r_lrange_other 8.508 r_scangle_it 7.62 r_scangle_other 7.618 r_dihedral_angle_1_deg 6.41 r_scbond_it 5.061 r_scbond_other 5.06
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.73 r_dihedral_angle_3_deg 14.498 r_dihedral_angle_2_deg 11.729 r_lrange_it 8.535 r_lrange_other 8.508 r_scangle_it 7.62 r_scangle_other 7.618 r_dihedral_angle_1_deg 6.41 r_scbond_it 5.061 r_scbond_other 5.06 r_mcangle_it 4.103 r_mcangle_other 4.103 r_mcbond_it 2.951 r_mcbond_other 2.948 r_angle_refined_deg 1.796 r_angle_other_deg 0.628 r_symmetry_nbd_other 0.482 r_nbd_refined 0.223 r_nbd_other 0.203 r_nbtor_refined 0.169 r_xyhbond_nbd_refined 0.168 r_symmetry_xyhbond_nbd_refined 0.152 r_symmetry_nbtor_other 0.124 r_symmetry_nbd_refined 0.115 r_chiral_restr 0.088 r_bond_refined_d 0.01 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 311 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction