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Crystal Structure of FtsZ with Z734736324
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-735 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.56 51.91
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.025 α = 90 b = 88.025 β = 90 c = 177.424 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-735 ftsz-735 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-735 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-735 2.826 44.013 98.9 0.457 0.475 0.131 0.98 5.9 13 18420
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-735 2.826 2.875 100 2.532 2.63 0.708 0.402 13.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.826 44.051 18413 910 98.814 0.163 0.159 0.166 0.2371 0.2368 48.111
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.013 -0.007 -0.013 0.043
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 16.028 r_dihedral_angle_6_deg 13.77 r_lrange_it 11.902 r_lrange_other 11.72 r_dihedral_angle_2_deg 8.919 r_scangle_it 8.736 r_scangle_other 8.734 r_dihedral_angle_1_deg 6.906 r_mcangle_other 6.468 r_mcangle_it 6.467
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 16.028 r_dihedral_angle_6_deg 13.77 r_lrange_it 11.902 r_lrange_other 11.72 r_dihedral_angle_2_deg 8.919 r_scangle_it 8.736 r_scangle_other 8.734 r_dihedral_angle_1_deg 6.906 r_mcangle_other 6.468 r_mcangle_it 6.467 r_scbond_it 5.495 r_scbond_other 5.494 r_mcbond_it 4.076 r_mcbond_other 4.076 r_angle_refined_deg 1.622 r_angle_other_deg 0.582 r_symmetry_nbd_other 0.489 r_symmetry_xyhbond_nbd_refined 0.345 r_symmetry_nbd_refined 0.275 r_xyhbond_nbd_refined 0.225 r_nbd_refined 0.223 r_nbd_other 0.209 r_nbtor_refined 0.171 r_symmetry_nbtor_other 0.107 r_symmetry_xyhbond_nbd_other 0.085 r_chiral_restr 0.071 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_xyhbond_nbd_other 0.005 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction