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Crystal Structure of FtsZ with Z2213892813
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-687 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.61 52.86
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.572 α = 90 b = 88.572 β = 90 c = 178.777 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-687 ftsz-687 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-687 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-687 2.008 44.286 100 0.187 0.195 0.054 0.998 11.2 13.3 52808
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-687 2.008 2.043 100 2.425 2.524 0.697 0.359 13.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.008 44.325 52805 2668 99.97 0.18 0.1785 0.1866 0.2121 0.2183 36.97
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.017 0.009 0.017 -0.056
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.52 r_dihedral_angle_6_deg 14.199 r_lrange_it 9.004 r_lrange_other 8.989 r_dihedral_angle_2_deg 8.332 r_scangle_it 7.764 r_scangle_other 7.762 r_dihedral_angle_1_deg 6.466 r_scbond_it 5.085 r_scbond_other 5.084
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.52 r_dihedral_angle_6_deg 14.199 r_lrange_it 9.004 r_lrange_other 8.989 r_dihedral_angle_2_deg 8.332 r_scangle_it 7.764 r_scangle_other 7.762 r_dihedral_angle_1_deg 6.466 r_scbond_it 5.085 r_scbond_other 5.084 r_mcangle_it 4.678 r_mcangle_other 4.678 r_mcbond_it 3.229 r_mcbond_other 3.228 r_angle_refined_deg 1.675 r_angle_other_deg 0.576 r_dihedral_angle_other_2_deg 0.379 r_symmetry_nbd_other 0.337 r_symmetry_xyhbond_nbd_refined 0.286 r_nbd_refined 0.22 r_symmetry_nbd_refined 0.189 r_xyhbond_nbd_refined 0.179 r_nbd_other 0.173 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.127 r_symmetry_xyhbond_nbd_other 0.125 r_chiral_restr 0.077 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 312 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction