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Crystal Structure of FtsZ with Z364577298
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-542 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.59 52.58
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.416 α = 90 b = 88.416 β = 90 c = 178.361 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-542 ftsz-542 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-542 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-542 1.93 44.208 100 0.216 0.224 0.061 0.998 9.6 13.4 59076
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-542 1.93 1.964 100 2.788 2.899 0.79 0.352 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.93 44.247 59069 2982 99.956 0.182 0.1803 0.188 0.2142 0.2197 33.389
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.002 -0.001 -0.002 0.008
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.614 r_dihedral_angle_3_deg 14.518 r_dihedral_angle_2_deg 10.181 r_lrange_it 8.905 r_lrange_other 8.872 r_scangle_it 7.704 r_scangle_other 7.703 r_dihedral_angle_1_deg 6.536 r_scbond_it 4.991 r_scbond_other 4.99
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.614 r_dihedral_angle_3_deg 14.518 r_dihedral_angle_2_deg 10.181 r_lrange_it 8.905 r_lrange_other 8.872 r_scangle_it 7.704 r_scangle_other 7.703 r_dihedral_angle_1_deg 6.536 r_scbond_it 4.991 r_scbond_other 4.99 r_mcangle_it 4.262 r_mcangle_other 4.262 r_mcbond_it 2.923 r_mcbond_other 2.919 r_angle_refined_deg 1.69 r_angle_other_deg 0.587 r_symmetry_nbd_other 0.4 r_nbd_refined 0.217 r_symmetry_nbd_refined 0.193 r_symmetry_xyhbond_nbd_refined 0.193 r_nbd_other 0.188 r_xyhbond_nbd_refined 0.178 r_nbtor_refined 0.167 r_symmetry_nbtor_other 0.104 r_chiral_restr 0.077 r_symmetry_xyhbond_nbd_other 0.069 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.003 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 306 Heterogen Atoms 24
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction