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Crystal Structure of FtsZ with Z64450924
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-513 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.62
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.524 α = 90 b = 88.524 β = 90 c = 178.077 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-513 ftsz-513 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-07 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-513 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-513 1.82 44.262 100 0.164 0.17 0.046 0.999 11.6 13.4 70485
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-513 1.82 1.852 100 2.75 2.854 0.761 0.345 13.6
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.82 44.301 70439 3582 99.895 0.181 0.1795 0.1876 0.2088 0.214 33.027
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.006 0.003 0.006 -0.018
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.579 r_dihedral_angle_6_deg 13.884 r_dihedral_angle_2_deg 12.986 r_lrange_other 9.029 r_lrange_it 9.023 r_scangle_it 7.92 r_scangle_other 7.919 r_dihedral_angle_1_deg 6.342 r_scbond_it 5.142 r_scbond_other 5.127
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.579 r_dihedral_angle_6_deg 13.884 r_dihedral_angle_2_deg 12.986 r_lrange_other 9.029 r_lrange_it 9.023 r_scangle_it 7.92 r_scangle_other 7.919 r_dihedral_angle_1_deg 6.342 r_scbond_it 5.142 r_scbond_other 5.127 r_mcangle_it 4.314 r_mcangle_other 4.314 r_mcbond_it 3.096 r_mcbond_other 3.088 r_angle_refined_deg 1.771 r_angle_other_deg 0.611 r_symmetry_nbd_other 0.431 r_symmetry_xyhbond_nbd_refined 0.298 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.179 r_nbd_other 0.176 r_nbtor_refined 0.167 r_symmetry_nbd_refined 0.136 r_symmetry_nbtor_other 0.106 r_symmetry_xyhbond_nbd_other 0.103 r_chiral_restr 0.085 r_bond_refined_d 0.009 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 308 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction