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Crystal Structure of FtsZ with F9995-1720
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-158 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.69
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.445 α = 90 b = 88.445 β = 90 c = 178.652 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-158 ftsz-158 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-06 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-158 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-158 2.086 44.222 97.5 0.235 0.244 0.068 0.997 9.3 13 45733
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-158 2.086 2.122 100 2.078 2.171 0.623 0.396 12.1
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.086 44.262 45719 2350 97.426 0.182 0.1802 0.1878 0.2165 0.2231 35.186
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.02 0.01 0.02 -0.066
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.925 r_dihedral_angle_6_deg 14.204 r_lrange_it 8.617 r_lrange_other 8.555 r_dihedral_angle_2_deg 7.99 r_scangle_it 7.258 r_scangle_other 7.257 r_dihedral_angle_1_deg 6.451 r_scbond_it 4.657 r_scbond_other 4.656
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.925 r_dihedral_angle_6_deg 14.204 r_lrange_it 8.617 r_lrange_other 8.555 r_dihedral_angle_2_deg 7.99 r_scangle_it 7.258 r_scangle_other 7.257 r_dihedral_angle_1_deg 6.451 r_scbond_it 4.657 r_scbond_other 4.656 r_mcangle_it 4.251 r_mcangle_other 4.251 r_dihedral_angle_other_2_deg 3.372 r_mcbond_it 2.865 r_mcbond_other 2.865 r_angle_refined_deg 1.66 r_angle_other_deg 0.618 r_symmetry_nbd_other 0.453 r_nbd_refined 0.216 r_nbd_other 0.206 r_symmetry_xyhbond_nbd_refined 0.201 r_symmetry_nbd_refined 0.197 r_xyhbond_nbd_refined 0.173 r_nbtor_refined 0.169 r_symmetry_nbtor_other 0.126 r_symmetry_xyhbond_nbd_other 0.096 r_chiral_restr 0.079 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 310 Heterogen Atoms 15
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction