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Crystal Structure of FtsZ with Z2692078340
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-976 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.53 51.37
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 87.828 α = 90 b = 87.828 β = 90 c = 176.239 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-976 ftsz-976 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-09 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-976 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-976 2.497 43.914 100 0.355 0.369 0.1 0.992 6.1 13.6 26663
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-976 2.497 2.54 100 2.894 3.002 0.794 0.335 14
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.497 43.953 26657 1335 99.948 0.172 0.1688 0.1752 0.2328 0.2332 49.828
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.008 -0.004 -0.008 0.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.361 r_dihedral_angle_6_deg 13.311 r_lrange_it 12.677 r_lrange_other 12.566 r_scangle_it 9.369 r_scangle_other 9.368 r_dihedral_angle_1_deg 6.735 r_mcangle_other 6.689 r_mcangle_it 6.687 r_dihedral_angle_2_deg 6.588
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.361 r_dihedral_angle_6_deg 13.311 r_lrange_it 12.677 r_lrange_other 12.566 r_scangle_it 9.369 r_scangle_other 9.368 r_dihedral_angle_1_deg 6.735 r_mcangle_other 6.689 r_mcangle_it 6.687 r_dihedral_angle_2_deg 6.588 r_scbond_it 5.899 r_scbond_other 5.897 r_mcbond_it 4.213 r_mcbond_other 4.212 r_angle_refined_deg 1.553 r_angle_other_deg 0.561 r_symmetry_nbd_other 0.435 r_symmetry_xyhbond_nbd_refined 0.357 r_xyhbond_nbd_refined 0.237 r_symmetry_nbd_refined 0.237 r_nbd_refined 0.22 r_nbd_other 0.199 r_nbtor_refined 0.168 r_symmetry_nbtor_other 0.138 r_symmetry_xyhbond_nbd_other 0.131 r_chiral_restr 0.07 r_chiral_restr_other 0.062 r_bond_refined_d 0.007 r_gen_planes_refined 0.005 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 19
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction