☰ Navigation Tabs
Crystal Structure of FtsZ with Z1216861874
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-915 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.78
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.394 α = 90 b = 88.394 β = 90 c = 179.199 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-915 ftsz-915 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-915 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-915 2.435 44.197 100 0.455 0.472 0.128 0.986 6.8 13.6 29624
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-915 2.435 2.477 100 2.83 2.943 0.804 0.386 13.4
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.435 44.236 29618 1502 99.956 0.18 0.1775 0.1822 0.235 0.235 34.016
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.006 0.003 0.006 -0.019
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.579 r_dihedral_angle_6_deg 14.02 r_dihedral_angle_2_deg 12.449 r_lrange_it 8.718 r_lrange_other 8.662 r_scangle_it 6.974 r_scangle_other 6.973 r_dihedral_angle_1_deg 6.758 r_mcangle_other 4.604 r_mcangle_it 4.603
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.579 r_dihedral_angle_6_deg 14.02 r_dihedral_angle_2_deg 12.449 r_lrange_it 8.718 r_lrange_other 8.662 r_scangle_it 6.974 r_scangle_other 6.973 r_dihedral_angle_1_deg 6.758 r_mcangle_other 4.604 r_mcangle_it 4.603 r_scbond_it 4.337 r_scbond_other 4.336 r_mcbond_it 2.856 r_mcbond_other 2.855 r_angle_refined_deg 1.605 r_angle_other_deg 0.572 r_symmetry_nbd_other 0.462 r_symmetry_xyhbond_nbd_refined 0.237 r_nbd_other 0.223 r_nbd_refined 0.217 r_xyhbond_nbd_refined 0.188 r_nbtor_refined 0.17 r_symmetry_nbd_refined 0.163 r_symmetry_nbtor_other 0.101 r_symmetry_xyhbond_nbd_other 0.081 r_chiral_restr 0.071 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 306 Heterogen Atoms 16
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction