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Crystal Structure of FtsZ with Z954606858
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-909 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.71 54.54
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 89.171 α = 90 b = 89.171 β = 90 c = 182.896 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-909 ftsz-909 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-909 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-909 2.298 44.585 100 0.314 0.327 0.09 0.991 6.8 13.1 36561
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-909 2.298 2.337 100 1.564 1.634 0.47 0.383 11.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.298 44.625 36559 1923 99.959 0.205 0.2021 0.208 0.2571 0.2581 31.139
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.008 0.004 0.008 -0.027
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.294 r_dihedral_angle_6_deg 14.152 r_lrange_it 9.074 r_lrange_other 8.958 r_dihedral_angle_1_deg 7.252 r_dihedral_angle_2_deg 5.878 r_scangle_it 5.51 r_scangle_other 5.509 r_mcangle_it 4.661 r_mcangle_other 4.661
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.294 r_dihedral_angle_6_deg 14.152 r_lrange_it 9.074 r_lrange_other 8.958 r_dihedral_angle_1_deg 7.252 r_dihedral_angle_2_deg 5.878 r_scangle_it 5.51 r_scangle_other 5.509 r_mcangle_it 4.661 r_mcangle_other 4.661 r_scbond_it 3.402 r_scbond_other 3.401 r_mcbond_it 2.825 r_mcbond_other 2.821 r_angle_refined_deg 1.616 r_angle_other_deg 0.574 r_symmetry_nbd_other 0.435 r_nbd_refined 0.227 r_xyhbond_nbd_refined 0.223 r_symmetry_xyhbond_nbd_refined 0.214 r_nbd_other 0.211 r_nbtor_refined 0.17 r_symmetry_nbd_refined 0.133 r_symmetry_nbtor_other 0.112 r_chiral_restr 0.075 r_symmetry_xyhbond_nbd_other 0.066 r_xyhbond_nbd_other 0.058 r_bond_refined_d 0.007 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 18
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction