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Crystal Structure of FtsZ with Z68404778
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-908 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.66 53.74
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.919 α = 90 b = 88.919 β = 90 c = 180.755 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-908 ftsz-908 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-908 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-908 1.961 44.459 100 0.204 0.213 0.058 0.998 6.1 13.3 57749
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-908 1.961 1.995 100 2.038 2.119 0.579 0.328 13.3
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 1.961 44.499 57684 2895 99.839 0.192 0.1902 0.1977 0.2248 0.2295 34.998
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.002 0.001 0.002 -0.005
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 15.524 r_dihedral_angle_6_deg 14.793 r_dihedral_angle_3_deg 14.386 r_lrange_it 8.677 r_lrange_other 8.621 r_scangle_it 7.174 r_scangle_other 7.172 r_dihedral_angle_1_deg 6.576 r_scbond_it 4.689 r_scbond_other 4.688
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_2_deg 15.524 r_dihedral_angle_6_deg 14.793 r_dihedral_angle_3_deg 14.386 r_lrange_it 8.677 r_lrange_other 8.621 r_scangle_it 7.174 r_scangle_other 7.172 r_dihedral_angle_1_deg 6.576 r_scbond_it 4.689 r_scbond_other 4.688 r_mcangle_it 4.339 r_mcangle_other 4.338 r_mcbond_it 2.973 r_mcbond_other 2.967 r_angle_refined_deg 1.679 r_angle_other_deg 0.615 r_symmetry_nbd_other 0.513 r_symmetry_xyhbond_nbd_other 0.288 r_nbd_refined 0.232 r_xyhbond_nbd_refined 0.218 r_nbd_other 0.19 r_symmetry_nbd_refined 0.18 r_nbtor_refined 0.169 r_symmetry_xyhbond_nbd_refined 0.164 r_symmetry_nbtor_other 0.115 r_chiral_restr 0.077 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 311 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction