14ZN | pdb_000014zn

Crystal Structure of FtsZ with Z68299550

X-RAY DIFFRACTION

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Starting Model(s)

Initial Refinement Model(s)
Type	Source	Accession Code	Details
experimental model	PDB	2Q1X	initial MR model

Crystallization

Crystalization Experiments
ID	Method	pH	Temperature	Details
ftsz-785	VAPOR DIFFUSION, SITTING DROP	5	294	0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.

Crystal Properties
Matthews coefficient	Solvent content
2.53	51.32

Crystal Data

Unit Cell
Length ( Å )	Angle ( ˚ )
a = 87.756	α = 90
b = 87.756	β = 90
c = 176.363	γ = 120

Symmetry
Space Group	P 65

Diffraction

Diffraction Experiment
ID #	Crystal ID	Scattering Type	Data Collection Temperature	Detector	Detector Type	Details	Collection Date	Monochromator	Protocol
ftsz-785	ftsz-785	x-ray	100	PIXEL	DECTRIS EIGER X 9M	KB	2025-04-10	M	SINGLE WAVELENGTH

Radiation Source
ID #	Source	Type	Wavelength List	Synchrotron Site	Beamline
ftsz-785	SYNCHROTRON	NSLS-II BEAMLINE 17-ID-1	0.920051	NSLS-II	17-ID-1

Data Collection

Overall
ID #	Resolution (High)	Resolution (Low)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Net I Over Average Sigma (I)	Redundancy	Number Reflections (All)	Number Reflections (Observed)	Observed Criterion Sigma (F)	Observed Criterion Sigma (I)	B (Isotropic) From Wilson Plot
ftsz-785	2.09	43.878	100	0.25	0.259	0.07	0.996	9.3	13.4		45377

Highest Resolution Shell
ID #	Resolution (High)	Resolution (Low)	Percent Possible (All)	Percent Possible (Observed)	R Merge I (Observed)	Rrim I (All)	Rpim I (All)	CC (Half)	Mean I Over Sigma (Observed)	Redundancy	Number Unique Reflections (All)
ftsz-785	2.09	2.126		100	2.199	2.295	0.652	0.329		12.1

Refinement

Statistics
Diffraction ID	Structure Solution Method	Cross Validation method	Resolution (High)	Resolution (Low)	Number Reflections (Observed)	Number Reflections (R-Free)	Percent Reflections (Observed)	R-Factor (All)	R-Work (Depositor)	R-Work (DCC)	R-Free (Depositor)	R-Free (DCC)	Mean Isotropic B
X-RAY DIFFRACTION	MOLECULAR REPLACEMENT	THROUGHOUT	2.09	43.917	45369	2308	99.976	0.179	0.1768	0.1844	0.2216	0.2244	36.037

Temperature Factor Modeling
Anisotropic B[1][1]	Anisotropic B[1][2]	Anisotropic B[1][3]	Anisotropic B[2][2]	Anisotropic B[2][3]	Anisotropic B[3][3]
-0.003	-0.001		-0.003		0.009

RMS Deviations
Key	Refinement Restraint Deviation
r_dihedral_angle_3_deg	14.295
r_dihedral_angle_6_deg	14.001
r_dihedral_angle_2_deg	10.345
r_lrange_it	9.068
r_lrange_other	9.027
r_scangle_it	7.459
r_scangle_other	7.457
r_dihedral_angle_1_deg	6.689
r_scbond_it	4.781
r_scbond_other	4.78
r_mcangle_other	4.292
r_mcangle_it	4.289
r_mcbond_it	2.878
r_mcbond_other	2.869
r_angle_refined_deg	1.605
r_angle_other_deg	0.56
r_symmetry_nbd_other	0.474
r_symmetry_nbd_refined	0.277
r_symmetry_xyhbond_nbd_refined	0.239
r_nbd_refined	0.214
r_xyhbond_nbd_refined	0.198
r_nbd_other	0.192
r_nbtor_refined	0.169
r_symmetry_nbtor_other	0.119
r_chiral_restr	0.072
r_symmetry_xyhbond_nbd_other	0.052
r_bond_refined_d	0.007
r_gen_planes_refined	0.006
r_bond_other_d	0.004
r_gen_planes_other	0.002

Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen Atoms	Number
Protein Atoms	4230
Nucleic Acid Atoms
Solvent Atoms	307
Heterogen Atoms	20

Software

Software
Software Name	Purpose
REFMAC	refinement
autoPROC	data reduction
Aimless	data scaling
XDS	data reduction
DIMPLE	phasing
PHASER	phasing
Coot	model building
gemmi	data extraction