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Crystal Structure of FtsZ with Z100643660
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-779 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.62 53
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.686 α = 90 b = 88.686 β = 90 c = 178.842 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-779 ftsz-779 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-779 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-779 2.035 44.343 100 0.265 0.276 0.076 0.996 8 13.3 50849
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-779 2.035 2.07 100 2.2 2.291 0.638 0.356 12.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.035 44.382 50843 2563 99.957 0.187 0.1856 0.1925 0.2215 0.2254 32.463
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.034 0.017 0.034 -0.109
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.791 r_dihedral_angle_6_deg 14.484 r_dihedral_angle_2_deg 9.642 r_lrange_it 8.195 r_lrange_other 8.132 r_dihedral_angle_1_deg 6.613 r_scangle_it 6.593 r_scangle_other 6.592 r_scbond_it 4.208 r_scbond_other 4.207
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.791 r_dihedral_angle_6_deg 14.484 r_dihedral_angle_2_deg 9.642 r_lrange_it 8.195 r_lrange_other 8.132 r_dihedral_angle_1_deg 6.613 r_scangle_it 6.593 r_scangle_other 6.592 r_scbond_it 4.208 r_scbond_other 4.207 r_mcangle_it 3.989 r_mcangle_other 3.989 r_mcbond_it 2.631 r_mcbond_other 2.629 r_angle_refined_deg 1.675 r_angle_other_deg 0.674 r_symmetry_nbd_other 0.528 r_symmetry_xyhbond_nbd_other 0.233 r_nbd_refined 0.219 r_symmetry_xyhbond_nbd_refined 0.216 r_xyhbond_nbd_refined 0.186 r_nbd_other 0.174 r_nbtor_refined 0.168 r_symmetry_nbd_refined 0.164 r_symmetry_nbtor_other 0.136 r_chiral_restr 0.083 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.005 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 313 Heterogen Atoms 33
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction