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Crystal Structure of FtsZ with Z57260539
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-751 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.6 52.76
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.621 α = 90 b = 88.621 β = 90 c = 178.206 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-751 ftsz-751 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-751 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-751 2.246 43.001 100 0.303 0.315 0.087 0.994 5.8 13.3 37713
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-751 2.246 2.284 100 2.308 2.404 0.666 0.349 12.9
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.246 43.038 37706 1977 99.928 0.189 0.1867 0.1923 0.2306 0.2352 37.917
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.022 0.011 0.022 -0.07
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.492 r_dihedral_angle_3_deg 14.442 r_dihedral_angle_2_deg 11.774 r_lrange_it 8.212 r_lrange_other 8.113 r_dihedral_angle_1_deg 6.753 r_scangle_it 6.341 r_scangle_other 6.34 r_mcangle_it 4.352 r_mcangle_other 4.352
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_6_deg 14.492 r_dihedral_angle_3_deg 14.442 r_dihedral_angle_2_deg 11.774 r_lrange_it 8.212 r_lrange_other 8.113 r_dihedral_angle_1_deg 6.753 r_scangle_it 6.341 r_scangle_other 6.34 r_mcangle_it 4.352 r_mcangle_other 4.352 r_scbond_other 4.023 r_scbond_it 4.021 r_mcbond_it 2.851 r_mcbond_other 2.85 r_angle_refined_deg 1.543 r_angle_other_deg 0.583 r_symmetry_nbd_other 0.458 r_symmetry_xyhbond_nbd_refined 0.232 r_nbd_refined 0.221 r_xyhbond_nbd_refined 0.207 r_symmetry_nbd_refined 0.194 r_nbd_other 0.177 r_symmetry_xyhbond_nbd_other 0.171 r_nbtor_refined 0.17 r_symmetry_nbtor_other 0.109 r_chiral_restr 0.072 r_bond_refined_d 0.006 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 309 Heterogen Atoms 20
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction