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Crystal Structure of FtsZ with Z384468096
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-718 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.57 52.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.176 α = 90 b = 88.176 β = 90 c = 177.427 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-718 ftsz-718 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-10 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-718 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.920051 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-718 2.345 44.088 100 0.321 0.333 0.091 0.993 7.2 13.5 32662
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-718 2.345 2.386 100 2.805 2.922 0.817 0.343 12.8
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.345 44.127 32650 1689 99.936 0.171 0.1677 0.1749 0.226 0.2261 43.493
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] 0.007 0.003 0.007 -0.023
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.274 r_dihedral_angle_6_deg 13.76 r_lrange_it 12.052 r_lrange_other 12.034 r_scangle_it 10.18 r_scangle_other 10.178 r_dihedral_angle_2_deg 8.197 r_scbond_it 6.56 r_scbond_other 6.558 r_dihedral_angle_1_deg 6.555
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 15.274 r_dihedral_angle_6_deg 13.76 r_lrange_it 12.052 r_lrange_other 12.034 r_scangle_it 10.18 r_scangle_other 10.178 r_dihedral_angle_2_deg 8.197 r_scbond_it 6.56 r_scbond_other 6.558 r_dihedral_angle_1_deg 6.555 r_mcangle_other 6.362 r_mcangle_it 6.361 r_mcbond_it 4.174 r_mcbond_other 4.168 r_angle_refined_deg 1.791 r_angle_other_deg 0.606 r_symmetry_nbd_other 0.411 r_symmetry_xyhbond_nbd_refined 0.262 r_nbd_refined 0.225 r_xyhbond_nbd_refined 0.213 r_symmetry_nbd_refined 0.208 r_nbtor_refined 0.171 r_nbd_other 0.16 r_symmetry_nbtor_other 0.124 r_chiral_restr 0.078 r_symmetry_xyhbond_nbd_other 0.071 r_bond_refined_d 0.008 r_gen_planes_refined 0.006 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 307 Heterogen Atoms 22
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction