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Crystal Structure of FtsZ with Z57329001
Starting Model(s) Initial Refinement Model(s) Type Source Accession Code Details experimental model PDB 2Q1X initial MR model
Crystallization Crystalization Experiments ID Method pH Temperature Details ftsz-704 VAPOR DIFFUSION, SITTING DROP 5 294 0.1 M ammonium sulfate, 15.6% (w/v) PEG 3350, 0.1 M Bis-Tris pH 5.0.
Crystal Properties Matthews coefficient Solvent content 2.57 52.07
Crystal Data Unit Cell Length ( Å ) Angle ( ˚ ) a = 88.193 α = 90 b = 88.193 β = 90 c = 177.337 γ = 120
Diffraction Diffraction Experiment ID # Crystal ID Scattering Type Data Collection Temperature Detector Detector Type Details Collection Date Monochromator Protocol ftsz-704 ftsz-704 x-ray 100 PIXEL DECTRIS EIGER X 9M KB 2025-04-08 M SINGLE WAVELENGTH
Radiation Source ID # Source Type Wavelength List Synchrotron Site Beamline ftsz-704 SYNCHROTRON NSLS-II BEAMLINE 17-ID-1 0.919764 NSLS-II 17-ID-1
Data Collection Overall ID # Resolution (High) Resolution (Low) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Net I Over Average Sigma (I) Redundancy Number Reflections (All) Number Reflections (Observed) Observed Criterion Sigma (F) Observed Criterion Sigma (I) B (Isotropic) From Wilson Plot ftsz-704 2.024 44.097 100 0.218 0.227 0.062 0.997 10.1 13.3 50752
Highest Resolution Shell ID # Resolution (High) Resolution (Low) Percent Possible (All) Percent Possible (Observed) R Merge I (Observed) Rrim I (All) Rpim I (All) CC (Half) Mean I Over Sigma (Observed) Redundancy Number Unique Reflections (All) ftsz-704 2.024 2.059 100 2.263 2.356 0.65 0.344 13
Refinement Statistics Diffraction ID Structure Solution Method Cross Validation method Resolution (High) Resolution (Low) Number Reflections (Observed) Number Reflections (R-Free) Percent Reflections (Observed) R-Factor (All) R-Work (Depositor) R-Work (DCC) R-Free (Depositor) R-Free (DCC) Mean Isotropic B X-RAY DIFFRACTION MOLECULAR REPLACEMENT THROUGHOUT 2.024 44.135 50737 2559 99.943 0.181 0.1792 0.1873 0.2182 0.222 34.78
Temperature Factor Modeling Anisotropic B[1][1] Anisotropic B[1][2] Anisotropic B[1][3] Anisotropic B[2][2] Anisotropic B[2][3] Anisotropic B[3][3] -0.005 -0.002 -0.005 0.016
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.433 r_dihedral_angle_6_deg 14.033 r_lrange_it 9.045 r_lrange_other 8.985 r_dihedral_angle_2_deg 8.505 r_scangle_it 7.53 r_scangle_other 7.528 r_dihedral_angle_1_deg 6.602 r_scbond_it 4.85 r_scbond_other 4.849
RMS Deviations Key Refinement Restraint Deviation r_dihedral_angle_3_deg 14.433 r_dihedral_angle_6_deg 14.033 r_lrange_it 9.045 r_lrange_other 8.985 r_dihedral_angle_2_deg 8.505 r_scangle_it 7.53 r_scangle_other 7.528 r_dihedral_angle_1_deg 6.602 r_scbond_it 4.85 r_scbond_other 4.849 r_mcangle_it 4.575 r_mcangle_other 4.575 r_mcbond_it 3.088 r_mcbond_other 3.085 r_angle_refined_deg 1.678 r_angle_other_deg 0.578 r_symmetry_nbd_other 0.467 r_symmetry_xyhbond_nbd_refined 0.285 r_nbd_refined 0.222 r_xyhbond_nbd_refined 0.218 r_nbtor_refined 0.17 r_symmetry_nbd_refined 0.162 r_nbd_other 0.161 r_symmetry_nbtor_other 0.13 r_chiral_restr 0.076 r_symmetry_xyhbond_nbd_other 0.035 r_chiral_restr_other 0.017 r_bond_refined_d 0.008 r_gen_planes_refined 0.007 r_bond_other_d 0.004 r_gen_planes_other 0.002
Non-Hydrogen Atoms Used in Refinement Non-Hydrogen Atoms Number Protein Atoms 4230 Nucleic Acid Atoms Solvent Atoms 312 Heterogen Atoms 21
Software Software Software Name Purpose REFMAC refinement autoPROC data reduction Aimless data scaling XDS data reduction DIMPLE phasing PHASER phasing Coot model building gemmi data extraction